IPNA, Spalenring 145, 4055 Basel, Seminarraum O504
Veranstalter:
IPNA/UFG/PRA
Reproducible, portable and efficient ancient genome reconstruction with nf-core/eager-pipeline
The broadening utilisation of ancient DNA to address archaeological, palaeontological, and biological questions is resulting in a rising diversity in the size of laboratories and scale of analyses being performed. In the context of this heterogeneous landscape, we present an advanced, and entirely redesigned and extended version of the EAGER pipeline for the analysis of ancient genomic data. This Nextflow pipeline aims to address three main themes: accessibility and adaptability to different computing configurations, reproducibility to ensure robust analytical standards, and updating the pipeline to the latest routine ancient genomic practices. The new version of EAGER has been developed within the nf-core initiative to ensure high-quality software development and maintenance support; contributing to a long-term life-cycle for the pipeline. nf-core/eager will assist in ensuring that a wider range of ancient DNA analyses can be applied by a diverse range of research groups and fields.
Gäste sind herzlich willkommen!
Für Studierende besteht die Möglichkeit, für das Forschungskolloquium (LV 72536-01) einen Kreditpunkt zu erwerben.
Für Detailinformationen wenden Sie sich bitte an Claudia Gerling (claudia.gerling@unibas.ch).
Veranstaltung übernehmen als
iCal